rs33376131 SNP Detail

Summary

• ID
  rs33376131
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153080406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCCTTTGTC TGCATACTTC TTTGATCCAG AAAACCTCCT
  GGATTTGACT CATACAATCA GAACTATTCC TTCAGACTTC TTGTCAAAAC TGTGAAAGAA
  Y
  TTTGCTTCTC TTTCAAAGCT GTTCTTCTGG TCTCACACTC TAGCCGTAGC TATGGAGAAG
  CTGACAGAAC CTGTTTCCAT AAAACAAACA CAATCCCTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45270882	mCV23160535	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss147988386	ENSMUSSNP5158742	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33376131					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153080406 () rs orientation: forward

Symbol	Name	Function Class
Plagl2	pleiomorphic adenoma gene-like 2	Intron
Rr567587	regulatory region 567587	within coordinates
Rr567588	regulatory region 567588	470 bp proximal
Tssr26894	transcription start site region 26894	552 bp upstream