rs33374230 SNP Detail

Summary

• ID
  rs33374230
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:128876567 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTG GGCTTGTTGA AGATGTGTGT
  R
  TTTCACTAAA TGTGTCACTT TTGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45270667	mCV24472929	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	G
ss320503970	CHEV_2_128860383	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33374230					SNP	G	G	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128876567 () rs orientation: forward

Symbol	Name	Function Class
Gm54152	predicted gene, 54152	within coordinates
Rr564832	regulatory region 564832	1013 bp proximal
Vinac1	vinculin/alpha-catenin family member 1	Intron