rs33372225 SNP Detail

Summary

• ID
  rs33372225
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127671857 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTTGACTT CAACAACCCA AATATCACAT AAAAGAGCAA
  TCATTCAGAA GTGTTCAAAA AGTCAGAAAC AGTATTTGCT TCATAGTCTA TCTAGATTAG
  Y
  TGATCTCCAA CGTCATTGTC TTATTTCTCA AGAGCACAGC TAAGTTAGAG GGTTAGACTA
  AGATCCAAAG AATGCCTCTC CTTTTGGTGT GATAGCCCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45269980	mCV22597084	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss147542349	ENSMUSSNP272804	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs33372225					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127671857 () rs orientation: forward

Symbol	Name	Function Class
Bub1	BUB1, mitotic checkpoint serine/threonine kinase	Intron
Cpgi12232	CpG island 12232	1493 bp proximal
Rr397289	regulatory region 397289	1838 bp upstream
Rr564601	regulatory region 564601	1247 bp proximal
Rr564602	regulatory region 564602	1912 bp proximal
Tssr26147	transcription start site region 26147	1880 bp downstream