rs33369883 SNP Detail

Summary

• ID
  rs33369883
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:9889163 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCAGTTGG TCCTCTCCCA
  GGATCAAAAC AGCCTCTAAA ACCTGAGACT TGGTCATCCC TTCCTGAGAC TTAACCAGCC
  TCCCAAACAA CAAACAGAGA CAGTGGACAT GAACAACACA AAAGAGAAAG TAATACAAAC
  CTGCTCAAGC ATACCTGTGA CGCACAGTGT CTGGGTCTTG AGGAGGATCT TCCCAGCCAA
  M
  ACACCTAATG TTGTTGTCTG CAAAAAGACC CTCACTCAAA ACAACCACAG AGACTGACAT
  TGTTGCAAAC TATAAGAGGA TTTTTTTTTA TTGATCCAAA CCATTGGGGA CCCTCCTCAG
  CACACACTGG GAGAGACCCA GAACAAAGAA AGAACACACT TTTTATACCT TGTAAGGGGC
  AGGTTTAGGC AACAAGGCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47789970	NES11637046	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33369883					SNP	A	A	A	A	A	A	C	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47789970	NES11637046	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:9889163 () rs orientation: forward

Symbol	Name	Function Class
Rr626475	regulatory region 626475	682 bp proximal