rs33365463 SNP Detail

Summary

• ID
  rs33365463
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:9562732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGTTTAT TTATCAAACA
  ATAAACAACA CATATGCAAA TATAAACATA TTTTTGTTAT ATCTAGTTCT AGTAAAATGT
  GTTACATTGA ATTTGATTTG AAATATCTAA GAAAATTAGT AGACTCAATT AATGCTTAGT
  GATTTGATTG CTTTTAACAC TATTCATTTT TTGCAACCTG AGTGTTATAA TTTTTGCTTT
  Y
  ATCTCATGGA GATTATATAT CTTGGGTAAT TTTAAACTCA AAATTCTCAC TGCAAACTTA
  TATGTCACCA ACATTTGTCC TAAATATACT GCCAATAGAC AAAGGATGTT GCATTTTAAT
  CACTCAGTAA GCAATAATTA AAGTTCATGG GAATAACTGT CAGGTAATTA AGGGGAAGCT
  CACTTACGTA CCAGATGCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss47789310	NES11648914	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs33365463					SNP	T	T	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47789310	NES11648914	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:9562732 () rs orientation: forward

Symbol	Name	Function Class
Rr626470	regulatory region 626470	986 bp proximal