rs33365411 SNP Detail

Summary

• ID
  rs33365411
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:76038524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTC CCCTAAGGAA CAGCTCCCGC
  R
  TGACAGCTGC TGCTGATGCT ATGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45770694	mCV22889947	ABI	CRAMUS_MOUSE	f	SNP	G	A				A		A
ss51745844	NES14733942	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	A		G	A	A	A		A	A	A	G		G
ss148693394	ENSMUSSNP6697717	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A						A
ss321571980	CHEV_5_76273889	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33365411					SNP	G	A	A	A	A	A	G	A	A	A	A	A	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51745844	NES14733942	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:76038524 () rs orientation: forward

Symbol	Name	Function Class
Gm73081	predicted gene, 73081	within coordinates
Rr613502	regulatory region 613502	307 bp distal
Rr613503	regulatory region 613503	516 bp proximal