rs33360967 SNP Detail

Summary

• ID
  rs33360967
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102279639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTATTTGC TAGGAAATGG
  AGCACTCTTC TTTCATCTCT TCCTGTTCCC TCTCTCCCTT TCCAGGCTGA ACTCAAATTT
  CTAGTCCTAA GGTCCATTTG AGGGAAGACA GAGAAATCTG CTTTTGCCTT TGTTCAGCTC
  CCCAGCCCCA ACCACAAAGG GGGTGGATCT GCATCCTCTG TTTTACAAAG CACACCCACT
  M
  GCCAGAGAAA ACTCAACCCC ATTCCAAAAG GAGATGAGAC CAGAGCCCTC AATCAAATCA
  AACCTCATGA ATTAAGTTCT AAATTTTAAA CTCCCTTTTA TTGAAATATA AGTTTGTTTA
  GTCTATTTAC AGCACAATTT ATGCACATAT ATACACACAG AAGGCAAATT CTGTCAAATA
  AAAAAGTTTT CTTACTAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45269501	mCV23728288	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C	C
ss320437736	CHEV_2_102289451	CHEVERUD	SCREENING_POP	f	SNP						A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33360967					SNP	C	C	A	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102279639 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11976	CpG island 11976	871 bp proximal
Fjx1	four jointed box 1	72 bp downstream
Rr561693	regulatory region 561693	1142 bp distal
Rr561694	regulatory region 561694	1445 bp proximal