rs33346190 SNP Detail

Summary

• ID
  rs33346190
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102632568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCAGTTAT GATGTACACC ACAGGCATCC GGACACTGCA
  TTACTATTCA GATCCCTGAA ACAATTTGAA GGAGCCAGGG AGCTAGGTTT CTCTTCTCCT
  K
  CTATCTAATG TTTCTTGTTA TTGATCATTT GTGCATAAAT GGACATAAAA AATTTTCCAG
  AAGGTAGATA TTAGTTATTT ATCTTACTCT GTAAATAAA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45267593	mCV25050011	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	G
ss147124390	ENSMUSSNP1915425	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33346190					SNP	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102632568 () rs orientation: forward

Symbol	Name	Function Class
Rr561739	regulatory region 561739	1732 bp proximal
Rr561740	regulatory region 561740	1825 bp proximal
Rr561741	regulatory region 561741	1918 bp proximal