rs33344640 SNP Detail

Summary

• ID
  rs33344640
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:151350661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTAGAATG TAGACAGGAC
  AGCCACCAAG GCTGACTCTT AGCTCCCACA CAGGAGGGAA CACCTCTCAT GGGAGTATGT
  ACTAGGAACT TTTATGTGAA TATAAACCAC TGGCATAGGG GAGAAAGACA ACATTGGGTA
  GTCTGTGATT TGTGTGGAGA GAGATAAGGA TGCAGATAGG GGTGTTACAC TGGGGCAGGG
  R
  GAAGGGGGGT TCAGAGTCAG GAGTAGAGAT GGAAGGGAGA GTTCACTATG ACCACAGTTC
  ATTTCCTCGT CTTGTATCTG AAAAGGCCAG ATAGGACAGA AGGAATTATG TGGACACAGA
  ATTAACACAG TCAGCTTAAT AGAGTCTGCC TTTTACAACA TCTGGAGAAG AGAAAGAGGA
  TTCAACATCT AACATACAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45767175	mCV23844868	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33344640					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:151350661 () rs orientation: forward

Symbol	Name	Function Class
D730045B01Rik	RIKEN cDNA D730045B01 gene	within coordinates
Gm3704	predicted gene 3704	within coordinates
Gm42906	predicted gene 42906	Intron
Tssr54686	transcription start site region 54686	954 bp downstream
Tssr54687	transcription start site region 54687	976 bp downstream