rs33341466 SNP Detail

Summary

• ID
  rs33341466
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153390994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGTCCCCAA GGTCACCCCT AAACTTCCTG GCTCTTCTCC
  ATGACACTGC CCCCTCCTCC TGGTGATTTC TCTCTTCTCC TCCCACCTGC CTCCCTCACC
  R
  ACCGACCGAT CAGTCACCAC AGAGCTAGGC ACAAGCCAAG CAATCTTTTG TGCATCCTCT
  CTGTGTAGCT GCAAGGAGGG GCCTACAGGA CCGGCTGCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45266647	mCV25321080	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147996166	ENSMUSSNP5808448	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs33341466					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153390994 () rs orientation: forward

Symbol	Name	Function Class
Gm75205	predicted gene, 75205	within coordinates
Rr567677	regulatory region 567677	1828 bp distal
Rr567678	regulatory region 567678	1111 bp distal
Rr567679	regulatory region 567679	204 bp distal
Rr567680	regulatory region 567680	230 bp proximal
Tssr26914	transcription start site region 26914	843 bp downstream