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rs33341466 SNP Detail
Summary
  • ID
    rs33341466
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr2:153390994 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          CAGTCCCCAA GGTCACCCCT AAACTTCCTG GCTCTTCTCC
    ATGACACTGC CCCCTCCTCC TGGTGATTTC TCTCTTCTCC TCCCACCTGC CTCCCTCACC
    R
    ACCGACCGAT CAGTCACCAC AGAGCTAGGC ACAAGCCAAG CAATCTTTTG TGCATCCTCT
    CTGTGTAGCT GCAAGGAGGG GCCTACAGGA CCGGCTGCC                       
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
C57BL/6J
DBA/2J
ss45266647 mCV25321080 ABI CRAMUS_MOUSE f SNP G G A
ss147996166 ENSMUSSNP5808448 ENSEMBL ENSEMBL_Sanger f SNP G A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
C57BL/6J
DBA/2J
rs33341466 SNP G G A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr2:153390994 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm75205 predicted gene, 75205 within coordinates
Rr567677 regulatory region 567677 1828 bp distal
Rr567678 regulatory region 567678 1111 bp distal
Rr567679 regulatory region 567679 204 bp distal
Rr567680 regulatory region 567680 230 bp proximal
Tssr26914 transcription start site region 26914 843 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory