rs33331946 SNP Detail

Summary

• ID
  rs33331946
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7655793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTGGAATT CCTACTTGAT
  TGATCATCTT GATTCTCAAT GAAGTTTTGC TAGTTGTGCT ACTGCTACTG TCTGATGGGC
  TTCAGTGTGA CCCTAGAGAA TGAAGAAACA GTTATGTGTT TGTGTTTATA GTGACTTGCA
  CAAGCTAAAG TATCAGAGAG GACATATCAA AAGCCAAGAT CATCTAATAG GTAGGTGATG
  R
  GTGACAAGCA GCAATCCTAC AGAATTATTC TACAGAATCC AGGCATTATT CTGAGATCTT
  AGTGATGAAT ATTGGACTCA CTCTAAGGAC CTTGACTGGA CCCCTAATCA GCAAGAAGTC
  GTCTAATGAG ATTGATGCCC CTTTTCCCTT CTAACCTTCT TTCTCTCATA CCTAGTGTTG
  GGGAGTTGGA ATGGTTTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47784892	NES11725920	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33331946					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47784892	NES11725920	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7655793 () rs orientation: forward

Symbol	Name	Function Class
Gm35051	predicted gene, 35051	within coordinates
Rr626301	regulatory region 626301	1001 bp proximal