rs33322728 SNP Detail

Summary

• ID
  rs33322728
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172197741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTCAGGCCT CTACCCAGCA GCCAGAACAC AGCAAGAGTT GAGGTGAAGC AACTAAAGCA
  CCGTATAAGC CAGCAAGGCG CACAGAGCTG CTCCTGCCTA TGTGATCTTT AAGAAGACCA
  GGAGCCAGGA AACCACTTTA AGATGTAAGC CATTGTGTGT CTCTAGTTTC TTAAGCAGAC
  CAAGTGAATG GCTTACAGTC TGAAACAAAT AAAAGCCTTT GTAAAAGTCT GCGGTCTGTC
  ATCTGGTAAG CCATCACTGC CGCCAGGAAG AGCGCCATGG GAATGTGGCA CTCCTCTGCA
  Y
  GTAAGGATAG TCACAAACTA GCCAGAGCTA GAGGAGGCAG TGTCCCGTGC TCAGTTTGCC
  TCCCTGGATT GCATCTCACT TAACTGCAGC TTGGGTGGAC AGTACTAGCA ATATTGCTAC
  TTCAACAAAG CCTTAGCACA GGACGGATGA CTAGAGGCCT CTTGTCCCAA GAGGTTAGAC
  TTCCACTCAG GCATGTTCTC AAGTTCCTGA TGGTGGTCCA GTTGGCCATG AAAGCCTGTT
  TCTCTAATTC CAAGTTCCCC CTCTGGTTGA TGGACAGATG GCACTGGCCA CTATCCAGCA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45264332	mCV23771682	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33322728					SNP	C	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172197741 () rs orientation: forward

Symbol	Name	Function Class
Aurka	aurora kinase A	369 bp downstream
Fam210b	family with sequence similarity 210, member B	72 bp downstream
Rr571656	regulatory region 571656	402 bp distal
Rr571657	regulatory region 571657	within coordinates