rs33321826 SNP Detail

Summary

• ID
  rs33321826
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:25404113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAG GGACTAGGCA GCCGTCCTTT
  M
  GTTGTTGAAT TTGACGATTT CTGAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J
ss39522422	mCV22798294	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss145380215	ENSMUSSNP1366161	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J
rs33321826					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25404113 () rs orientation: forward

Symbol	Name	Function Class
4930568E02Rik	RIKEN cDNA 4930568E02 gene	570 bp upstream
Rr370183	regulatory region 370183	558 bp downstream
Rr523507	regulatory region 523507	1615 bp distal
Rr523508	regulatory region 523508	1711 bp distal
Rr523509	regulatory region 523509	80 bp distal
Tssr5037	transcription start site region 5037	576 bp downstream
Tssr143142	transcription start site region 143142	537 bp downstream
Tssr143143	transcription start site region 143143	521 bp downstream
Tssr146818	transcription start site region 146818	737 bp upstream
Tssr146819	transcription start site region 146819	671 bp upstream
Uqcc4	ubiquinol-cytochrome c reductase complex assembly factor 4	mRNA-UTR