rs33319488 SNP Detail

Summary

• ID
  rs33319488
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:69415245 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACG AAAGCCAGGG AGAGAGCTCG
  K
  GGGTTCTCCT TGAGTCAGTC TCTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45264490	mCV22345809	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss320331724	CHEV_2_69422958	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs33319488					SNP	T	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:69415245 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11710	CpG island 11710	302 bp proximal
Lrp2	low density lipoprotein receptor-related protein 2	Intron
Rr558427	regulatory region 558427	within coordinates
Rr558428	regulatory region 558428	1118 bp proximal
Tssr24442	transcription start site region 24442	1120 bp downstream