rs33301410 SNP Detail

Summary

• ID
  rs33301410
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17254877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCTCTTCCA TCTCTTGTAT TCTGTTGCTG ATGCTTGCGT CTATGGTTCC AGATTTCTTT
  CCTAGGGTTT CTATCTCTAG CGTTGCCCCA TTTTGGGTTT TCTTTATTGT GTCTACTTCG
  CTTTTTAGGT CTAGTATGAT TTTGTTCATT TCCATCACCT GTTTGGATGT TTTCCTGTTT
  TTCTTTAAGG ACTTGTAACT CTTTAGCAGT GTTCTCCTGT ATTTCTTTAA GTGAGTTATT
  AAAGTCCTTC TTGATGTCCT CTACCATCAT CATGAGATAT GCTTTTAAAT CCGGGTCTAG
  M
  TTTTCGGGTG TGTTTGGGTG CTCAGGACTG GGTGAGGTGG GAGTGCTGCA TTCTGATGAT
  GGTGAGTGGT CTTGGCTTCT GTTAGTAAGA TTCTTACGTT TGCCTCTCGC CATCTGGTAA
  TCTCTGGAGT CAGTTGTTAT AGTTGTTTCT GGTTAGAGCT TGTTCCTCTT GTGATTCTGT
  TAGTCTCTGT CAGCAGACCT GGGAGACTAG CTCTCTCCTG AGTTTCAGTG GTCAGAGCAC
  TCTCTGCAGG CAAGCTCTCT TCTTGTAGGA AAGGTGCCCA GATATCTGGC TTTGGAACCT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45261949	mCV23892173	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33301410					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17254877 () rs orientation: forward

Symbol	Name	Function Class
Rr573816	regulatory region 573816	1134 bp proximal