rs33289546 SNP Detail

Summary

• ID
  rs33289546
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172600437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGA TGTGAATGGA CCTTGGAGCC
  R
  CTCCCCACCC CCACCACTCC CAAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45260632	mCV22949993	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss148322324	ENSMUSSNP4162710	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320620091	CHEV_2_172584145	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33289546					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172600437 () rs orientation: forward

Symbol	Name	Function Class
Gm74644	predicted gene, 74644	within coordinates
Rr571720	regulatory region 571720	1450 bp distal
Rr571721	regulatory region 571721	807 bp distal
Rr571722	regulatory region 571722	within coordinates
Rr571723	regulatory region 571723	59 bp proximal