rs33273843 SNP Detail

Summary

• ID
  rs33273843
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133591671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACCTTATTA GAAGAAAGAT TGCCTTTCTG
  ATTAGATGTG AAGGGAGTGT TATGCAATAA ATATGAAGAG CTGACTGAAA GATAAATATC
  AGTtctctct ctctctttcc ctctctctct ctctccctct ctctctcttt ctctctctcc
  M
  tctcCATATT AAGGGAGCAC ATGCTTTTCT GGGCTTCTTC TAATGATAAT TTTAGCTTGC
  CTACTGTCTA AGGTATCTTG GGATGGCTGC ATTTCATGGA GTTCTGGAGA CATAATGGTG
  CCTTAGCCAT GATGGGTAAT GCTCAGGTTT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45258054	mCV27569966	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss320511735	CHEV_2_133575487	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33273843					SNP	A	C	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133591671 () rs orientation: forward

Symbol	Name	Function Class
Gm39940	predicted gene, 39940	within coordinates
Rr565636	regulatory region 565636	931 bp distal
Rr565637	regulatory region 565637	567 bp proximal