rs33272672 SNP Detail

Summary

• ID
  rs33272672
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118407070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGACGGCC CTTCAGACTA AGCTCCTTGG GCTCCATCCT
  GGCATCCAAA CCTGCCTAGG TTTTTTGCCT GAAGTCTGAG CTTAGCGCTA ACCCAAGACA
  W
  ATAGTGTCAA GGCAGCTCAC CCGTCGGTTC GGCTGATTTA TTTGACACAA ATAAGCTCGC
  TGACCTGATT TAGCCTTGCG GGGGACCACA GACCAAGTC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45758448	mCV23380134	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A	T
ss149162410	ENSMUSSNP120048	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss321662388	CHEV_5_118719014	CHEVERUD	SCREENING_POP	f	SNP						A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33272672					SNP	T	T	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118407070 () rs orientation: forward

Symbol	Name	Function Class
Gm73266	predicted gene, 73266	238 bp upstream
Rr618848	regulatory region 618848	within coordinates
Rr618849	regulatory region 618849	189 bp proximal
Rr618850	regulatory region 618850	260 bp proximal