rs33267518 SNP Detail

Summary

• ID
  rs33267518
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:6547736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTCACGC ATTTGAGTTT
  GGTTTGCCTG ACATTTGTTA AGAATGTTAC TTGGCCTAGA GGTAACAATG CTGGATAAAG
  ACAGCTCACA ACCATGAGGG CTTTAGATTT TTGTGAAGAG GGGAAAGACT CTGTAAAGCA
  AATCATTTTA CTTAAATATG CCCAAGGGAT AAAATTAAGG AAAAAAATAT CGAGTAAAAT
  R
  CAAAACTAGG GGAGCAATGA ACCCAAACTG AGAGTAAAAG AAGGGATTCC AAGTGAGGAT
  GGGGTGAAAA CGAGAGCGAT GATACACTGA GAACAAGGAG GGAAGGCATG CTCAGGCCAT
  GGGATCTGCA TGAGGAAGAG AAGTCCAGAG GCAGGAAACG CAAGAGCATG TCTGGAACAC
  AAGACCTGAA CTGACATCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47776794	NES11717921	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33267518					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47776794	NES11717921	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6547736 () rs orientation: forward

Symbol	Name	Function Class
Rr626249	regulatory region 626249	344 bp proximal