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rs33267518 SNP Detail
Summary
  • ID
    rs33267518
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr6:6547736 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GTTTTCACGC ATTTGAGTTT
    GGTTTGCCTG ACATTTGTTA AGAATGTTAC TTGGCCTAGA GGTAACAATG CTGGATAAAG
    ACAGCTCACA ACCATGAGGG CTTTAGATTT TTGTGAAGAG GGGAAAGACT CTGTAAAGCA
    AATCATTTTA CTTAAATATG CCCAAGGGAT AAAATTAAGG AAAAAAATAT CGAGTAAAAT
    R
    CAAAACTAGG GGAGCAATGA ACCCAAACTG AGAGTAAAAG AAGGGATTCC AAGTGAGGAT
    GGGGTGAAAA CGAGAGCGAT GATACACTGA GAACAAGGAG GGAAGGCATG CTCAGGCCAT
    GGGATCTGCA TGAGGAAGAG AAGTCCAGAG GCAGGAAACG CAAGAGCATG TCTGGAACAC
    AAGACCTGAA CTGACATCTC                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss47776794 NES11717921 PERLEGEN MM_PANEL2 f SNP G G G G G G A G G G G G G A G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs33267518 SNP G G G G G G A G G G G G G A G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss47776794 NES11717921 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr6:6547736 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr626249 regulatory region 626249 344 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory