rs33263085 SNP Detail

Summary

• ID
  rs33263085
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:102389869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAATAAGGA GTCAGCTCCC ACTCACCATG
  TATATGAGGT TCATCTTTAA TGTAGATGTC TTGGTATGAG TATATCATAT TTATTTATAC
  ATGTACACAG AAGAATACAA GTATAGATTT GAATGCTTAT ATGTTCATGG ATAGGTTATT
  D
  atatatatat atatatatat atatatatat atatatatat atatataGTG TTATGATGTA
  CAACACAAGT TAGGATCAAA TCTCAGATCT GTCATCTATT TCCCTCTTGT TTTTACCTTT
  CTTGGGTGAC tgtggtggtt tgaatgtgct                                 
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45256981	mCV23731009	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss320438864	CHEV_2_102399681	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33263085					SNP	G	G	A	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102389869 () rs orientation: forward

Symbol	Name	Function Class
Pamr1	peptidase domain containing associated with muscle regeneration 1	Intron
Rr561705	regulatory region 561705	104 bp distal