rs33260487 SNP Detail

Summary

• ID
  rs33260487
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75845898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGCAACGAAG ACCACGAGCG CTTATTTCAA TGCTGGCTGT
  ATTTTCAGTT TGGTAGCTCT TTGAACAGTG GTTTCAAGAC CTTATAAAGA ATTCACAACC
  R
  AAATTGTGAA ATTAAAAAAA AAAAATAGTG GTGACTAGAA ACCGAAAAAG AGCAAGATCT
  TCATTTCCTG TTGCGTGACA AGGTGACAGC AGTGAGCTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45256583	mCV23799647	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss146769889	ENSMUSSNP5631439	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs33260487					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75845898 () rs orientation: forward

Symbol	Name	Function Class
Gm75271	predicted gene, 75271	within coordinates
Pde11a	phosphodiesterase 11A	Intron
Rr559634	regulatory region 559634	1341 bp proximal