rs33259558 SNP Detail

Summary

• ID
  rs33259558
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:50517838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCA AGAAAAATGA AAAGAAAAAA
  R
  AGAGAGAGAG ATAGCAGCCA TTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss39513611	mCV23756386	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss145744638	ENSMUSSNP863728	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs33259558					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:50517838 () rs orientation: forward

Symbol	Name	Function Class
Gm9191	predicted gene 9191	1941 bp downstream
Gm37173	predicted gene, 37173	within coordinates
Gm64618	predicted gene, 64618	812 bp upstream