rs33233265 SNP Detail

Summary

• ID
  rs33233265
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:49660633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGAAGAT GACTCAGGGC
  TGGTTTCTAG TCAGGAGAGG TCGAAGACTC CCACCCTGGG GACCTGCCCA AGGTCAGATG
  GACAGACCTC TACTGAGAGT AAACTGGAAG CGGGTGCTGT ACTGAAATCT TCATGACACC
  ATTGGTGTGG AACACACTTT CAAATCAGTT CTCTCTTTGT AGAATGCCTG GGTCAGGACC
  R
  TGCCTGACCT GCCTGGTGAT GTGTGTCCTG GTTAATGAGT GATGTCTGAT TGTCCCCTGG
  GACAGGAAGT GCTTTGTGCT ATTCCGATGG CACACAGATG CAGAATGTAC TGACTTTTGG
  AAGAGACTAC CGTGACTGGG TCAGGACAAA ATACTTAGAT GCAGGATGGA GGAAGCTCTG
  TTATCCATCA TGTTAGCCGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45253074	mCV25117605	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss146526565	ENSMUSSNP2561092	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33233265					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:49660633 () rs orientation: forward

Symbol	Name	Function Class
Kif5c	kinesin family member 5C	Intron
Rr556668	regulatory region 556668	1094 bp distal
Rr556669	regulatory region 556669	within coordinates