rs33226509 SNP Detail

Summary

• ID
  rs33226509
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:142094924 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGG GGCTCCACCA CTGAGCCATG
  M
  CCCCAGCCCC TCCCTGGAGG ATTCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45752905	mCV25013578	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss144586658	ENSMUSSNP5849557	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321708044	CHEV_5_142585123	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33226509					SNP	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:142094924 () rs orientation: forward

Symbol	Name	Function Class
D330005C11Rik	RIKEN cDNA D330005C11 gene	262 bp upstream
Sdk1	sidekick cell adhesion molecule 1	Intron