rs33225291 SNP Detail

Summary

• ID
  rs33225291
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101293806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATAGAAGA GAGAGCCACT
  TAGGGGCCGA ATTACCCAGT AGTGAACTAC TAAAGACGAG CACCATTGCT ATACACCATT
  GCTCCGTTGG AAAAGGGGGA GGGGGTCATG TAAGCAAAGA ATACGTGCGA AGGGCAGGAC
  ATTTCAGAGC CATGTCTGGC ATTTTCAGAT GTCATGAGCA GCTGAGGCTC TGAGCTTCAC
  R
  GGGTCTGAGA CATAGCTCAA TTCTAGGGCT TGCCCTCTAA GGTTCTTGAA TGGTTTAGGT
  TTTCAGGACT TTTATATCTC ATCCTTGGAC GTGTGGTGTG AAAACAGACT GCTGTCATCA
  TAACAAGGTC CTTTGAAATC CAGAAAGAAC AGCCCCATCA ATCAAGATAT CATTCTCATT
  AGTCTCTTTC TAGCCTATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45252323	mCV24390234	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss147073758	ENSMUSSNP3274998	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss320428364	CHEV_2_101303618	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33225291					SNP	G	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101293806 () rs orientation: forward

Symbol	Name	Function Class
Rr561500	regulatory region 561500	683 bp distal
Rr561501	regulatory region 561501	1016 bp proximal