rs33218524 SNP Detail

Summary

• ID
  rs33218524
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156146344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCTCAGACC TATGTTCACA
  GAGCTTAGTT TTGATGTCTC TAGCTATCTG CAAAGTACCA AAGAGCTGGG ACTGGAGAAG
  ACGTGTAGCG TATTAGCCAT AAGGGATACT TGACATACAG GTCAAGGCCT AAGGGCACAG
  CGTGACTGGG ACTAGCTCTG TGCTCTGGTA GGAAGAATAG GTTTAGACAC TGTCTGCCCT
  R
  ACTGGGTTTT TCCTGAGTGG ATGAGCTTGA CAGCAGAGGC ACTCCTTGCC AAGGTGGAGG
  AGACTTCCCC AGAGGCCTCT GGCAGGAACA TAGCAGCCTG TCTCCCTGTC CTCTGCATCT
  GCGATACACT TATGTCCAGC CATTCCTTTG TCTACCCATT GTCTGATACA GGGGATGCTG
  CACCACCCAG CCTCAGTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46786845	NES10987586	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G		G	A		G
ss321445014	CHEV_4_155435996	CHEVERUD	SCREENING_POP	f	SNP									A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33218524					SNP	G	G	G	G	G	G	G	G	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46786845	NES10987586	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156146344 () rs orientation: forward

Symbol	Name	Function Class
Rr606656	regulatory region 606656	1576 bp distal
Rr606657	regulatory region 606657	1985 bp proximal
Tssr40788	transcription start site region 40788	1819 bp downstream