rs33212465 SNP Detail

Summary

• ID
  rs33212465
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103672013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACTA TGGTGTTCTA GGGCTTTTAA
  Y
  CCAAGGTTTC AAACTGTTTC GCATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45250646	mCV22333305	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147139754	ENSMUSSNP2157957	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss320442897	CHEV_2_103681825	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33212465					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103672013 () rs orientation: forward

Symbol	Name	Function Class
Gm13879	predicted gene 13879	1747 bp downstream
Gm56364	predicted gene, 56364	1750 bp downstream
Gm75184	predicted gene, 75184	within coordinates
Rr373620	regulatory region 373620	246 bp upstream
Rr561947	regulatory region 561947	745 bp proximal