rs33210754 SNP Detail

Summary

• ID
  rs33210754
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156064230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTCCCAAA TAATTGCTAC AAACTTAACA GTCTTCATTA
  ATTACCCATA ATGAGATAAT TTCAGCATTA GTGTAAGGTA CTATGATTTC TTCTGGGTCT
  R
  TCAGTTTCTG ATAATCAAAA GTCTTATTCT TCCTCTTACA ATTAGATCAG AAACCTTTTC
  AACATACGTT TAAGTTTTTT AATCTGTTAA TGTGCTAAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46786152	NES10990175	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	G	A	G	G		G	G	G	G		A
ss148123462	ENSMUSSNP2334113	ENSEMBL	ENSEMBL_Sanger	f	SNP		A						A
ss321444256	CHEV_4_155353882	CHEVERUD	SCREENING_POP	f	SNP											G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33210754					SNP	A	A	A	A	G	A	G	A	G	G	G	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46786152	NES10990175	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156064230 () rs orientation: forward

Symbol	Name	Function Class
Rr606625	regulatory region 606625	1014 bp proximal