rs33208230 SNP Detail

Summary

• ID
  rs33208230
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156063724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAATAGTC CAAATGTCCT
  TCTGAGAACC CATTCATGTG ATGATGGTCC TTCATAATGA CAGTCCCGAT CATCTGTCCT
  TCTGCCAATG TCCAGTTCAG CATCAAGGTT TTCCAGTCTG CCAGTTTGAT GAACAATCTG
  TCCTTCAGCC AGTTTGTTGA GTTGTTCCCA TGCAGGGGTG TCAGCTTTCT GCTTCATCTG
  K
  GTTGCTGTCT TTTTGCATCT CTTCATTCCT TGAGTCATGC CTTTCATGTG GAAGCCTCTT
  ATATGGATCA GATCATTATC AATTTTGATG GAATCTATGG CCTTTCATCA CCTGTGGAAA
  TACAGACAGA ACCTTTTCTA CAACATAACA CGTTCCCTGA CTTCCATCCT GATGTTGAAC
  CATCTTTAAA GTATACCGTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46786128	NES10990162	PERLEGEN	MM_PANEL2	f	SNP	T	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs33208230					SNP	T	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46786128	NES10990162	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156063724 () rs orientation: forward

Symbol	Name	Function Class
Rr606625	regulatory region 606625	1520 bp proximal