rs33198619 SNP Detail

Summary

• ID
  rs33198619
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:159428100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATCC CTCAGAACTT TGCCCTGCCA
  R
  TTTCAGTTGT TCTTTGTATA AACCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45249507	mCV22919323	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss148134159	ENSMUSSNP3780968	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320591768	CHEV_2_159411916	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33198619					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:159428100 () rs orientation: forward

Symbol	Name	Function Class
D2Mit411	DNA segment, Chr 2, Massachusetts Institute of Technology 411	247 bp proximal
Rr568924	regulatory region 568924	570 bp proximal
Rr568925	regulatory region 568925	620 bp proximal
Rr568926	regulatory region 568926	999 bp proximal