rs33192205 SNP Detail

Summary

• ID
  rs33192205
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:38684509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTATC TGGACAAGGT ACTGTCAGCG
  Y
  GCCAGGTCAG GAACAAGACA GACAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45749024	mCV22717194	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss148266572	ENSMUSSNP2207931	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss321518760	CHEV_5_38918405	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33192205					SNP	C	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:38684509 () rs orientation: forward

Symbol	Name	Function Class
Tssr50807	transcription start site region 50807	29 bp downstream
Tssr50808	transcription start site region 50808	114 bp downstream
Tssr50809	transcription start site region 50809	515 bp downstream
Wdr1	WD repeat domain 1	mRNA-UTR