rs33188187 SNP Detail

Summary

• ID
  rs33188187
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:9598081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGACTTCTT TTGTGGCTGG GTTACCTCAC TCAGGATGAT ATCCTCCAGA TACATCCATT
  TGCCCAAGAA TTTCATAAAT TCATTGTTTT TAATAGCTGA GTAGTACTCC ATTGTGTAAA
  TGTACCACAA TTTCTGTATC CATTCCTCTC TTGAGGAACA ACTGGATTAT TTTCAGCTTC
  TGGCTATTAT AAATAAGGCT GCTATGAACA TAGCAGGGCA TGTGTCCTTA TTACCAGTTG
  GAACATCTTC TTGGTATATG CCCAGGAGAG GTATTGCTGG ATCTTCCCAT AGTACTATGT
  M
  CAATTTTCTG AGGAACAGCC AGAATGATTT CCAGAGTGGT TGTATAAGCT TGCAATACCA
  CCAGCAATGG AGGAGTGTTC CTCTTTCTCC ACATTCTCGC CAGAATATGC TCTCAACTGA
  ATTTTTGATT TTAGTCTTTC TGACTGGTGT GAGATGGAAT CTCAGGGTTG TTTTGATTTG
  CATTTCCCTG ATAATTAAGG ATGTTGAACA TTTTTTCAGG TGCTTCTCAG CCCTTCAGTA
  TTCCTCAGTT GAGAATTCTT TGCTTAGCTC TGTATCCCAT TTTTAATGGG GTTATTTAAA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45248291	mCV23866470	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33188187					SNP	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:9598081 () rs orientation: forward

Symbol	Name	Function Class
Rr626471	regulatory region 626471	1456 bp proximal
Rr626472	regulatory region 626472	1529 bp proximal