rs33180358 SNP Detail

Summary

• ID
  rs33180358
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:104354848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTGTAAGCC AGTCCCAATT AAATGTTCTC TTTTATAAGA
  ATTTACATGT GGGTTGAAGA GATGGTTCAA TGGTTAAGAG AACTGGCTGC TCTTCCAAAG
  R
  ACCTGGGTTC AGTTCCAGCA CTCACATGGC AGCTCACAAC TGTCTGTAAC TTTAATTTCA
  GGGGATCTGA CACCTTCACA CAGACAGACA CTTGGGCAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45247491	mCV23468627	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	A
ss147150223	ENSMUSSNP6808439	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33180358					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:104354848 () rs orientation: forward

Symbol	Name	Function Class
Rr562086	regulatory region 562086	1002 bp proximal