rs33174217 SNP Detail

Summary

• ID
  rs33174217
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:164493820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACGTGCAG AAACACCAGG
  ATCCCATGGG CAGATACAGT GAGGACGATG ATCCAAGGCT TCATGGTAGA CTGTGCGTTC
  ACAGGAAGAC AAATCCTCAC CCACTGCTGT AAGGAGCAGA AAAGAAAGGA AGGCAAACTG
  GGTAAGGAGA AGGACACACC AGTGAGCGTG TGGACTCCCT GTCTTTCCTG TCCCTCCCCT
  R
  ACCCCCTACA TGTTTATCAT CCCCACCCGC CATCTTTTCC CCTCAATCTG CTTCCTGTCT
  CACAAGACAC GCCCCTTCCT TTTTGAAATG ACTTATTTTT AGAAGACATT TCTTACTCTA
  AGAAGAAAAC AAATCCTTAG TCTATATGAT TTTTAAAATA CAAAGAGGAA ACAGAGACAT
  ATCAATAATT CCTCTATCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45246317	mCV23183368	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148229892	ENSMUSSNP5878881	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33174217					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164493820 () rs orientation: forward

Symbol	Name	Function Class
Rr569671	regulatory region 569671	1060 bp proximal
Tssr21622	transcription start site region 21622	1926 bp upstream
Tssr21623	transcription start site region 21623	1940 bp upstream
Tssr21624	transcription start site region 21624	1995 bp upstream
Wfdc9	WAP four-disulfide core domain 9	Intron