rs33162805 SNP Detail

Summary

• ID
  rs33162805
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127676093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGTAACTC ACCATAAGCC ACTGCATGTG GAATGCCCTA
  TAAATGCTTT GCTGAGGAGG AGGTGAGTCT GTTGCTCTTC CCAGGGCCAG GTGCAGTGTG
  S
  AGAGAGAAGC CAGAAACAAT TTTTAGAGAC TTTCTCTTGT ACTGAAGACC TTGTACAGCT
  CTTGGGGACG AATTCAGATT CCCTCTCCAG TCTACTGCA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45244451	mCV22597346	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	G
ss147542455	ENSMUSSNP5378423	ENSEMBL	ENSEMBL_Sanger	f	SNP		C			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33162805					SNP	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127676093 () rs orientation: forward

Symbol	Name	Function Class
Rr564602	regulatory region 564602	1818 bp distal
Rr564603	regulatory region 564603	1182 bp distal