rs33155724 SNP Detail

Summary

• ID
  rs33155724
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95874657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAACACAA AAACCCGTTC
  TTCCTCACAT TAACTATATA TTTCCTTTTA TTTATTATTA AATACTTAAG ACGTGGTACC
  AGATTCTGAG GATGGATTCC CATAAGTTGA CATTCAACTT AACCTCTCAG CAACCCGATG
  GAAGCCCCTT ATCTCCTAAC CTCTGTGCCT CAGTTTCCCC TTCTCCGGTA GCATGGCACT
  Y
  TTCTTGTCAC CTGCTGCTGT GGTCCGCAGA TTGACGGGTT TGGTGTGGAA CATTTCCATG
  TGAGTTTTTC TACGTGTAGT TTGTATGTTA AATATACACA GTAGCAAAGA ATTTGTGCAT
  ATTTTAAAAC CTTACATAAG TGGCCTCATA CTTGTTCTGT AATGTGAGTC CCCTTAGTCT
  TTGGCTTGTA AGATTTACCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46778300	NES10733494	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33155724					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46778300	NES10733494	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95874657 () rs orientation: forward

Symbol	Name	Function Class
Rr581106	regulatory region 581106	776 bp distal
Rr581107	regulatory region 581107	1327 bp distal
Rr581108	regulatory region 581108	1315 bp proximal