rs33151848 SNP Detail

Summary

• ID
  rs33151848
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95907106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGGGGCAG TCTGAACCTG
  ATCTGGGAGA AAGGCTTTGC CAACTTTACA AAGGTCTGAT ACCATGGTCC TTAACATGGC
  TGGCTCATGT CAGAACTTCA CTTGTTTAGG ATATCAAGAG AAGTCAGGAC CTAAGTGATG
  GTACCGCGTG CATCACATGG CTTTCTGAAT CCCTCTTATC TCTGACAACA CATTTCTCAT
  R
  TACTACCTCA ACAGAGCCCA TCAAACACTG AAGCCTGTGC TGTCAAATAC ACAAAGAGTG
  TGTTTATTCC ATACACAATC ACAAGTGGGT CGGGGTGGGC TCATCGTCGG CTCGCAGTCC
  CGGGGTCTGT TCCAGCAGTC CAGGAATCGG GGTTACCTGG AGTGAGTCAG AGCAAACACA
  AGGGCCAGCC CCAAAGCCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	PWD/PhJ
ss46778654	NES10731937	PERLEGEN	MM_PANEL2	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	PWD/PhJ
rs33151848					SNP	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46778654	NES10731937	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95907106 () rs orientation: forward

Symbol	Name	Function Class
Rr581117	regulatory region 581117	1974 bp distal
Rr581118	regulatory region 581118	within coordinates
Rr581119	regulatory region 581119	1349 bp proximal
Vps45	vacuolar protein sorting 45	38 bp downstream