rs33148611 SNP Detail

Summary

• ID
  rs33148611
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95845158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACCCCCCC AACTCCAAGC
  CTCCCCCTCT GCCCCTCTGC CTCCCAGTGC TGGGATTAAA GGCACGCACT GCTATTGTCT
  GGCCAGAATT TGTTCTTTTA AGCCAAGTGT AGGGGCACTT GCCATGGTTG GTTTAAGATG
  AATGGGGGCC ACGTGCCAGA AGGACGCAGT CCCTATGAGT ACCAGGAGGA AGCGGTTGCC
  S
  GGATGCTTGC TCACCTTTGA CAATGTTTTC TAAAGATGGA GATGAAGATG AGGAAGATGA
  GGACGAAGAT GAAGCTGGCC CACCGGAAGG CTATGAAGAG GAGGAAGATG ACGATGAGGA
  TGAAGCTGGC TCAGAAGTGG GAGAGGGAGA AGAGGAGGTG GGCCTCTCAT ACTTAATGAA
  AGACGAAATT CAGGTGAATG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46777973	NES10735054	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33148611					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46777973	NES10735054	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95845158 () rs orientation: forward

Symbol	Name	Function Class
Anp32e	acidic nuclear phosphoprotein 32 family member E	Intron
Rr581091	regulatory region 581091	1802 bp distal
Rr581092	regulatory region 581092	1095 bp proximal
Rr581093	regulatory region 581093	1172 bp proximal
Tssr30661	transcription start site region 30661	689 bp downstream
Tssr30662	transcription start site region 30662	57 bp upstream