rs33148606 SNP Detail

Summary

• ID
  rs33148606
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95843974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCGTGCGTC TGTGCGTGTT
  GGTTTTCTGG GGCCCAGGGA TTGAATCTAC ATTGCCAGGC ATGGCCAGGC CTTGTCCGTG
  GGCTTATTGT GGTGGTACCT GCCTGTAATC TCAGCACTCT AGAGGCTAAA GCAACTGAGA
  ATTCAAGGCC AGCTTGGGCT ATGTAATGGG ACGTTACCCT GTCTTTAAGA AGAAAAAGAT
  S
  GGAGACTAAG TCTTGGTAGC CCAGGCTGGC CTCCCACTCG GACCTTCCTG CCCTGGCTGG
  GTTATGGTGT GTGCTGGCAC ACTTGGGGTG CTGTTGCCTA TCTGCCCAGC TTCTGTCAGC
  AAAAATGCCT GGGGTGTCTG CAAGAAACTA AGTTGTAAGA CATTTGCTGG GGACACAGCG
  GTGACCAACC AAAGTTTCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46777967	NES10735137	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33148606					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46777967	NES10735137	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95843974 () rs orientation: forward

Symbol	Name	Function Class
Anp32e	acidic nuclear phosphoprotein 32 family member E	Intron
Rr581091	regulatory region 581091	618 bp distal
Tssr30660	transcription start site region 30660	1826 bp downstream
Tssr30661	transcription start site region 30661	481 bp upstream
Tssr30662	transcription start site region 30662	1241 bp upstream