rs33148558 SNP Detail

Summary

• ID
  rs33148558
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155324446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTG GTTTTAGTCC CATCCTGCCT
  Y
  ATTCCCACAT ACTCACTTCT ATTCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss46777591	NES11004069	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	C	T	C	C	C
ss148112921	ENSMUSSNP467170	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs33148558					SNP	T	T	T	T	T	T	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46777591	NES11004069	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155324446 () rs orientation: forward

Symbol	Name	Function Class
Gm33187	predicted gene, 33187	276 bp upstream
Rr606426	regulatory region 606426	1127 bp distal
Rr606427	regulatory region 606427	1990 bp proximal