rs33133586 SNP Detail

Summary

• ID
  rs33133586
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:157683057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGATCTGG GGAGGCACTT
  AGTGTGGGGG ATGGGTCAGA AAGAGCCACT TGCCCTTGGG TGCAGTAATA TGACTGGCTG
  CCTCCTTGGA TTTATAAAGA ATTGCACAGT GTGTATTGTC TCCTTGGTTT TAACTACTTT
  AGCATAGGCA GGGAGGATAA AAGAACTGGG ATCCAGAAAT GGCATCTGAC CTTTACTTCC
  Y
  GGCTCTCTTT TAAATTCTTA TTAAAATAGG CCCAATTTTC CTTGTATTGC CTCATTAGGT
  AGGTGAGTTA TTGAGTTTGT AGCCGTTCTA GTTAATTGCG CTGTTTTAAC ATGGTTCCCC
  TGGAGGCTGT TAAGAGCTTT GAGGGGGTGA GCTCCCAAGC AGTGTAGGTG TGTGGCATGC
  TTGCTGGGCA TGCGCGTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45240860	mCV22928368	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss148107335	ENSMUSSNP917801	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33133586					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:157683057 () rs orientation: forward

Symbol	Name	Function Class
Ctnnbl1	catenin, beta like 1	Intron
Rr374147	regulatory region 374147	within coordinates
Rr568596	regulatory region 568596	within coordinates