rs33129677 SNP Detail

Summary

• ID
  rs33129677
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143333299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTCACGTG GACATTTGCT
  TCTTTGAGCT CCCTAAAAGT AAGGAGAGAT TCCTGTTTAT TTCTGGCTTT TGGATTCCAA
  CAAAAATGCA GGTAGGTGAT ACCCTATCAT TACTGGCGAA AAATGAATCA AATATTCTTT
  TAGGACCAAT GTCAAGCAAC AGGAAAGAAA TGGGAGGGCA AGCAGCATGT TGAATCTCGA
  R
  TGTGGTCCTT GGAGAATAAC CAGTACTAGG CTGATCTCAT ATGCTAAGAC TGTGGTACCA
  TGGAAAGAAG GACTGGGAAA GACTCTTCCT ATGGCTGGAG AGGTGGCTTA GCAGTAAAGT
  GCTCGCTGAG AAAACATGAA GAACAAAGCT CAGATCCTCA GCACCCAAGT AAGTACCAGG
  TGGGGGTGGT GACTATCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45240266	mCV24511511	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147760631	ENSMUSSNP2241731	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33129677					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143333299 () rs orientation: forward

Symbol	Name	Function Class
Rr566292	regulatory region 566292	252 bp distal