rs33123961 SNP Detail

Summary

• ID
  rs33123961
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:85993489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGATGATTAG AAGGATTACA AAGAGGATGA TCTGAAGTTC AGGATCTTCT GTAAGCCCCA
  AGAGGATGAA TTCTGTCACC ACTGAATGGT TGCTTTTGGC CATTCAGTAC ATGCAAAGAG
  TTTTATGATC AGCCCCTTCA AAAGAAATCT TCTGAGTGAT CTTGATTCTG GAAGAAACAA
  CCCAAGTTCA TATTAAAAGA CAATAACAAA ATATATTATC TTCCCTCAAA AGGGAACTCT
  GGTTTGCACT TTGTGCATAG GGTTTTACTT GCATGGTAAT TGTGAAATGA TCTAAAACCT
  W
  CTAATCGAAG GTTCTTCAGG AAGTTAAGCA TAAGCACAAA TCTTCACTAA CCTGAAATAA
  CCCTGCATTA ACAGTTATAA AGTAAACTGG GAAAAGCAAA TTTATTAGGA AATTACAGTT
  TCACAGAGTT TGTACATAAT TCCCTAAATA TTTTGTGCAT CAAAATACTT ACTATTAGGA
  AATAAGTGGT GTATAAAGAA GGCCTCAGAA AACATATTAA ACACATATAT CTCTAGGCTT
  TGCAGTTAGG AACTTTTACT GAATTTTTGC TTTTGTATAT TTAAGTGTTC TAAATTTCAT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45240123	mCV25235522	ABI	CRAMUS_MOUSE	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs33123961					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:85993489 () rs orientation: forward

Symbol	Name	Function Class
Or5al7	olfactory receptor family 5 subfamily AL member 7	Intron