rs33123113 SNP Detail

Summary

• ID
  rs33123113
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133223756 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTGACTCT TGGCACATTT
  TCCAAGACCC ACCAAGTCTG TTGTTTAATA ATTTCAAGCA TAACCTCATT ATCTATCCAC
  GTGTAGCTTT CAGGCCCTTG ATAGAAGACA CACACTGAAG AATTAATGGT GGATTGAGCT
  AGCAGCCAGC CCCTTGGTAG GCACCCCACC TGACTGTGGA CTGGGCCAGC CAACACTTTT
  R
  TTTTGCAAAA GTATCCATTT CTTTCCCCAC AGCCAAAGAA TTCTCATTTA GGAAAACATG
  GTGCATGTAA GGAGTCAAAG CAAATGGAAC ACTGGGTCTG ATGACCCAAC TCACCTTAAA
  CTGCAAGAAG TCGAGTCAAC TCCCACATCC CAGGTGGAGG AAACAGGAGC CCTGATAAGG
  AAGGAAACAG AAGCCCAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45240106	mCV23923106	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147626249	ENSMUSSNP6258924	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33123113					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133223756 () rs orientation: forward

Symbol	Name	Function Class
Rr565593	regulatory region 565593	516 bp distal
Rr565594	regulatory region 565594	614 bp distal
Rr565595	regulatory region 565595	1004 bp proximal