AACCT CTGAGTAGCA GACTAAGCAG Y CCCAAGTGAG CCTTTGCCCT ACTAC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46772566 | NES10999493 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | T | T | T | C | C | C | T | T | T | T |
ss148106757 | ENSMUSSNP4213705 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | |||||||||||
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
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rs33107703 | SNP | C | C | C | T | T | T | C | C | C | T | T | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46772566 | NES10999493 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr4:154910122 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr606270 | regulatory region 606270 | within coordinates | ||||||
Rr606271 | regulatory region 606271 | 285 bp proximal | ||||||
Rr606272 | regulatory region 606272 | 382 bp proximal | ||||||
Rr606273 | regulatory region 606273 | 1475 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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