rs33106955 SNP Detail

Summary

• ID
  rs33106955
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95185161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGGAAAG ATAGCTCAGC
  GGTTCCTAGC ACCCACATGG TTGGTTCACA ACAGCTTGTA ATTCCAGCTC CAGGAGACTT
  AATAACCCCC GCTCTGAACT GTGAGGGTGC ACGTGGCAGA TTCTCACAGA TACACAAACA
  CACACAAATT TCTTCTTAAA AAGGAAACAT TAACAGATTC TAGAGGAACT GGATGAAAAG
  K
  AATAAAAAAT GGATTTTGTT TTGTTTTGTT TTTTGAGACA GGGTTTCTCT GTATAGCCCT
  GGCTGTCCTG GAACTCACTT TGTAGACCAG GCTGGCCTCG GACCCAGCTG AAAAGGAATA
  AAAAAAGGAT CTTTTATCTT TTACACTTCA CATGTTTTGT GCTTCAATGT TTTCCTTATA
  TTCTTCCATA GTTAAAAAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46772840	NES10658716	PERLEGEN	MM_PANEL2	f	SNP	G	T	T	G	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33106955					SNP	G	T	T	G	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46772840	NES10658716	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95185161 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580884	regulatory region 580884	120 bp distal