rs33106703 SNP Detail

Summary

• ID
  rs33106703
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154910035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCACCCTCTA TCCAAGCTTG TTTCCAGCTT GTTCTTCTGC
  CTGTATAGGG ACAATAAGGG GGAGTTTTCT ACCAGAACAC AATCACCTTG GAACTCTATT
  Y
  TGATGGTGAC AAATGTCAGG AACGGCTGCA GGACAGAATT GGCCACCTTG GTCCGCAGAG
  CAACCTCTGA GTAGCAGACT AAGCAGTCCC AAGTGAGCCT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46772554	NES10999489	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs33106703					SNP	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46772554	NES10999489	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154910035 () rs orientation: forward

Symbol	Name	Function Class
Rr606270	regulatory region 606270	69 bp proximal
Rr606271	regulatory region 606271	372 bp proximal
Rr606272	regulatory region 606272	469 bp proximal
Rr606273	regulatory region 606273	1562 bp proximal