rs33104729 SNP Detail

Summary

• ID
  rs33104729
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118406936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTTCGGGAA CTTCTGTGTA AGGGTGTCCC TAAAAGTTCC
  TTAGCAGCCT CTGTTTGGAG CTATGCTGGC TCCTATAGGC TTATGCAGCG CCCTTCCCCC
  R
  TGCTGAACAC AAACCTTCCG GGTGGGTGTG AATCTGGACG GCCCTTCAGA CTAAGCTCCT
  TGGGCTCCAT CCTGGCATCC AAACCTGCCT AGGTTTTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45737729	mCV23380126	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
ss149162400	ENSMUSSNP2398758	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss321662386	CHEV_5_118718880	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33104729					SNP	A	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118406936 () rs orientation: forward

Symbol	Name	Function Class
Gm73266	predicted gene, 73266	372 bp upstream
Rr618848	regulatory region 618848	within coordinates
Rr618849	regulatory region 618849	323 bp proximal
Rr618850	regulatory region 618850	394 bp proximal