rs33102791 SNP Detail

Summary

• ID
  rs33102791
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147786382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGAAGTTC TCCTAGGAAA CACTTATCGA TCAGTGCTCG
  CTGGGACACT GGTATTGACA ATTTGCCTTT TCTCAGAAAC ACACAGCAAA AACACCCTTT
  Y
  AGATGTAGGT TGAAACAACT TCCATTGCTC AACATTAGCT TTTTTTCCTG GAAACAGCTG
  ATAGGAAAGG GATGTTAACT ACTGATAAAT TATTTCCCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45237521	mCV24540208	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147906968	ENSMUSSNP1825838	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33102791					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147786382 () rs orientation: forward

Symbol	Name	Function Class
9030622O22Rik	RIKEN cDNA 9030622O22 gene	1 bp downstream
Rr566828	regulatory region 566828	1495 bp distal
Rr566829	regulatory region 566829	within coordinates