rs33102114 SNP Detail

Summary

• ID
  rs33102114
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:143820919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAACTCCC CAATGAACAG
  CCTCAGCAGC AATAAGAAGA TGTTAACGTA AGGGCACCTG AGACTTGGCA CCTCGCTGCT
  CCAGCAGCAG CTACCCCTCC ACTGTCCAGC TACAGAACAT GCCTGCCAGG CCCAGGCCCT
  ACTTTCTCCA CCAGCAGGGA GCGCATCAGC TCACTCCAGG ACTTGCCCTG TGAGTACCTA
  Y
  AGACAGCTAG AGGCTAAATG GAGGTGAGAG TATTACTATA GATTCCCAAA CAGCTCTGCC
  TAGGACAGAC CCAGCTTATT TTCTTGCTTC TAAACAGTGT ATGCACTGAG AAGTCTGCAG
  AATGCTAGGC TTGGAGAGGT AAGTAGAAAA GAGGACCACA TATGCAACAC AGCAGGCACA
  GAGCGGTCAA GCAACAAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45237404	mCV22374132	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33102114					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143820919 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr566349	regulatory region 566349			1766 bp proximal
Rr566350	regulatory region 566350			1973 bp proximal
Rrbp1	ribosome binding protein 1			Intron
				Noncoding-Transcript-Variant